THOC2

Protein-coding gene in the species Homo sapiens
THOC2
Identifiers
AliasesTHOC2, CXorf3, THO2, dJ506G2.1, hTREX120, MRX12, MRX35, THO complex 2
External IDsOMIM: 300395; MGI: 2442413; HomoloGene: 69669; GeneCards: THOC2; OMA:THOC2 - orthologs
Gene location (Human)
X chromosome (human)
Chr.X chromosome (human)[1]
X chromosome (human)
Genomic location for THOC2
Genomic location for THOC2
BandXq25Start123,600,561 bp[1]
End123,733,056 bp[1]
Gene location (Mouse)
X chromosome (mouse)
Chr.X chromosome (mouse)[2]
X chromosome (mouse)
Genomic location for THOC2
Genomic location for THOC2
BandX|X A4Start40,883,868 bp[2]
End41,009,551 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • secondary oocyte

  • Achilles tendon

  • sural nerve

  • ventricular zone

  • epithelium of colon

  • right lung

  • visceral pleura

  • left ovary

  • gastric mucosa

  • body of pancreas
Top expressed in
  • Rostral migratory stream

  • sciatic nerve

  • retinal pigment epithelium

  • primitive streak

  • ciliary body

  • tail of embryo

  • medullary collecting duct

  • belly cord

  • vestibular membrane of cochlear duct

  • median eminence
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
  • protein binding
  • RNA binding
  • mRNA binding
Cellular component
  • THO complex
  • nuclear speck
  • THO complex part of transcription export complex
  • transcription export complex
  • nucleus
  • nucleoplasm
Biological process
  • poly(A)+ mRNA export from nucleus
  • mRNA processing
  • mRNA transport
  • neuron development
  • viral mRNA export from host cell nucleus
  • RNA splicing
  • generation of neurons
  • RNA export from nucleus
  • mRNA export from nucleus
  • mRNA 3'-end processing
  • cell morphogenesis
  • blastocyst development
  • regulation of gene expression
  • regulation of mRNA export from nucleus
  • negative regulation of neuron projection development
  • stem cell division
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

57187

331401

Ensembl

ENSG00000125676

ENSMUSG00000037475

UniProt

Q8NI27

B1AZI6

RefSeq (mRNA)

NM_001081550
NM_020449

NM_001033422

RefSeq (protein)

NP_001075019

NP_001028594

Location (UCSC)Chr X: 123.6 – 123.73 MbChr X: 40.88 – 41.01 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

THO complex subunit 2 is a protein that in humans is encoded by the THOC2 gene.[5][6]

THO2 is part of the TREX (transcription/export) complex, which includes TEX1 (MIM 606929), HPR1 (MIM 606930), ALY (MIM 604171), and UAP56 (MIM 606390).[supplied by OMIM][6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000125676 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000037475 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Strasser K, Masuda S, Mason P, Pfannstiel J, Oppizzi M, Rodriguez-Navarro S, Rondon AG, Aguilera A, Struhl K, Reed R, Hurt E (May 2002). "TREX is a conserved complex coupling transcription with messenger RNA export". Nature. 417 (6886): 304–8. Bibcode:2002Natur.417..304S. doi:10.1038/nature746. PMID 11979277. S2CID 1112194.
  6. ^ a b "Entrez Gene: THOC2 THO complex 2".

Further reading

  • Coffey AJ, Brooksbank RA, Brandau O, et al. (1998). "Host response to EBV infection in X-linked lymphoproliferative disease results from mutations in an SH2-domain encoding gene". Nat. Genet. 20 (2): 129–35. doi:10.1038/2424. PMID 9771704. S2CID 9347438.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi:10.1073/pnas.0404720101. PMC 514446. PMID 15302935.
  • Masuda S, Das R, Cheng H, et al. (2005). "Recruitment of the human TREX complex to mRNA during splicing". Genes Dev. 19 (13): 1512–7. doi:10.1101/gad.1302205. PMC 1172058. PMID 15998806.
  • Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
  • Beausoleil SA, Villén J, Gerber SA, et al. (2006). "A probability-based approach for high-throughput protein phosphorylation analysis and site localization". Nat. Biotechnol. 24 (10): 1285–92. doi:10.1038/nbt1240. PMID 16964243. S2CID 14294292.
  • Olsen JV, Blagoev B, Gnad F, et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983.


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