SMARCA1 |
---|
|
Identifiers |
---|
Aliases | SMARCA1, ISWI, NURF140, SNF2L, SNF2L1, SNF2LB, SNF2LT, SWI, SWI2, hSNF2L, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 |
---|
External IDs | OMIM: 300012; MGI: 1935127; HomoloGene: 55711; GeneCards: SMARCA1; OMA:SMARCA1 - orthologs |
---|
Gene location (Human) |
---|
| Chr. | X chromosome (human)[1] |
---|
| Band | Xq25-q26.1 | Start | 129,446,501 bp[1] |
---|
End | 129,523,500 bp[1] |
---|
|
Gene location (Mouse) |
---|
| Chr. | X chromosome (mouse)[2] |
---|
| Band | X|X A4 | Start | 46,898,245 bp[2] |
---|
End | 46,981,851 bp[2] |
---|
|
RNA expression pattern |
---|
Bgee | Human | Mouse (ortholog) |
---|
Top expressed in | - Epithelium of choroid plexus
- tibia
- endothelial cell
- ventricular zone
- right adrenal cortex
- left adrenal cortex
- parietal pleura
- seminal vesicula
- stromal cell of endometrium
- cartilage tissue
|
| Top expressed in | - Gonadal ridge
- vas deferens
- fossa
- efferent ductule
- internal carotid artery
- atrium
- trigeminal ganglion
- ureter
- external carotid artery
- ovary
|
| More reference expression data |
|
---|
BioGPS |
| More reference expression data |
|
---|
|
Gene ontology |
---|
Molecular function | - ATP-dependent DNA/DNA annealing activity
- DNA binding
- nucleotide binding
- ATP-dependent activity, acting on DNA
- helicase activity
- hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
- protein binding
- nucleic acid binding
- nucleosome binding
- hydrolase activity
- ATP binding
- transcription factor binding
- ATPase activity
- DNA-binding transcription factor activity, RNA polymerase II-specific
| Cellular component | - CERF complex
- nucleus
- nucleoplasm
- intracellular membrane-bounded organelle
- NURF complex
| Biological process | - chromatin remodeling
- regulation of transcription, DNA-templated
- transcription, DNA-templated
- positive regulation of transcription, DNA-templated
- brain development
- neuron differentiation
- chromatin organization
- regulation of transcription by RNA polymerase II
- positive regulation of transcription by RNA polymerase II
| Sources:Amigo / QuickGO |
|
Orthologs |
---|
Species | Human | Mouse |
---|
Entrez | | |
---|
Ensembl | | |
---|
UniProt | | |
---|
RefSeq (mRNA) | NM_001282874 NM_001282875 NM_003069 NM_139035 NM_001378261
|
---|
NM_001378262 NM_001378263 NM_001378264 |
| |
---|
NM_001290708 NM_053123 NM_001358618 NM_001358619 |
|
---|
RefSeq (protein) | NP_001269803 NP_001269804 NP_003060 NP_001365190 NP_001365191
|
---|
NP_001365192 NP_001365193 |
| |
---|
NP_001277637 NP_444353 NP_001345547 NP_001345548 |
|
---|
Location (UCSC) | Chr X: 129.45 – 129.52 Mb | Chr X: 46.9 – 46.98 Mb |
---|
PubMed search | [3] | [4] |
---|
|
Wikidata |
View/Edit Human | View/Edit Mouse |
|