SEPT3

Protein-coding gene in the species Homo sapiens
SEPTIN3
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

3SOP, 4Z51, 4Z54

Identifiers
AliasesSEPTIN3, SEP3, bK250D10.3, septin 3, SEPT3
External IDsOMIM: 608314; MGI: 1345148; HomoloGene: 99740; GeneCards: SEPTIN3; OMA:SEPTIN3 - orthologs
Gene location (Human)
Chromosome 22 (human)
Chr.Chromosome 22 (human)[1]
Chromosome 22 (human)
Genomic location for SEPTIN3
Genomic location for SEPTIN3
Band22q13.2Start41,969,475 bp[1]
End41,998,221 bp[1]
Gene location (Mouse)
Chromosome 15 (mouse)
Chr.Chromosome 15 (mouse)[2]
Chromosome 15 (mouse)
Genomic location for SEPTIN3
Genomic location for SEPTIN3
Band15|15 E1Start82,153,003 bp[2]
End82,178,775 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • right frontal lobe

  • ventricular zone

  • dorsolateral prefrontal cortex

  • cingulate gyrus

  • anterior cingulate cortex

  • prefrontal cortex

  • Brodmann area 9

  • cerebellar hemisphere

  • amygdala
Top expressed in
  • dentate gyrus of hippocampal formation granule cell

  • cerebellar vermis

  • superior frontal gyrus

  • lobe of cerebellum

  • primary visual cortex

  • subiculum

  • piriform cortex

  • cingulate gyrus

  • primary motor cortex

  • hippocampus proper
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • nucleotide binding
  • GTP binding
  • protein binding
  • identical protein binding
  • molecular function
  • GTPase activity
  • molecular adaptor activity
Cellular component
  • cytoplasm
  • cell junction
  • synapse
  • cytoskeleton
  • septin ring
  • microtubule cytoskeleton
  • septin complex
  • septin filament array
  • neuron projection
  • presynaptic cytoskeleton
  • presynapse
Biological process
  • cell cycle
  • cell division
  • mitotic cytokinesis
  • septin ring assembly
  • cilium assembly
  • cytoskeleton-dependent cytokinesis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

55964

24050

Ensembl

ENSG00000100167

ENSMUSG00000022456

UniProt

Q9UH03

Q9Z1S5

RefSeq (mRNA)

NM_145734
NM_019106
NM_145733
NM_001363845

NM_011889
NM_001358836
NM_001358837
NM_001368642
NM_001368643

NM_001368644
NM_001368645
NM_001368646
NM_001368647
NM_001368784
NM_001368785

RefSeq (protein)

NP_061979
NP_663786
NP_001350774

NP_036019
NP_001345765
NP_001345766

Location (UCSC)Chr 22: 41.97 – 42 MbChr 15: 82.15 – 82.18 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Neuronal-specific septin-3 is a protein that in humans is encoded by the SEPT3 gene.[5]

Function

This gene belongs to the septin family of GTPases. Members of this family are required for cytokinesis. Expression is upregulated by retinoic acid in a human teratocarcinoma cell line. The specific function of this gene has not been determined. Alternative splicing of this gene results in multiple transcript variants.[5]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000100167 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000022456 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b "Entrez Gene: SEPT3 septin 3".

Further reading

  • Bonaldo MF, Lennon G, Soares MB (September 1996). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Research. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.
  • Hartley JL, Temple GF, Brasch MA (November 2000). "DNA cloning using in vitro site-specific recombination". Genome Research. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Wiemann S, Weil B, Wellenreuther R, Gassenhuber J, Glassl S, Ansorge W, Böcher M, Blöcker H, Bauersachs S, Blum H, Lauber J, Düsterhöft A, Beyer A, Köhrer K, Strack N, Mewes HW, Ottenwälder B, Obermaier B, Tampe J, Heubner D, Wambutt R, Korn B, Klein M, Poustka A (March 2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Research. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  • Methner A, Leypoldt F, Joost P, Lewerenz J (April 2001). "Human septin 3 on chromosome 22q13.2 is upregulated by neuronal differentiation". Biochemical and Biophysical Research Communications. 283 (1): 48–56. doi:10.1006/bbrc.2001.4741. PMID 11322766.
  • Xue J, Milburn PJ, Hanna BT, Graham ME, Rostas JA, Robinson PJ (August 2004). "Phosphorylation of septin 3 on Ser-91 by cGMP-dependent protein kinase-I in nerve terminals". The Biochemical Journal. 381 (Pt 3): 753–60. doi:10.1042/BJ20040455. PMC 1133885. PMID 15107017.
  • Collins JE, Wright CL, Edwards CA, Davis MP, Grinham JA, Cole CG, Goward ME, Aguado B, Mallya M, Mokrab Y, Huckle EJ, Beare DM, Dunham I (2005). "A genome annotation-driven approach to cloning the human ORFeome". Genome Biology. 5 (10): R84. doi:10.1186/gb-2004-5-10-r84. PMC 545604. PMID 15461802.
  • Xue J, Tsang CW, Gai WP, Malladi CS, Trimble WS, Rostas JA, Robinson PJ (November 2004). "Septin 3 (G-septin) is a developmentally regulated phosphoprotein enriched in presynaptic nerve terminals". Journal of Neurochemistry. 91 (3): 579–90. doi:10.1111/j.1471-4159.2004.02755.x. PMID 15485489. S2CID 2730644.
  • Wiemann S, Arlt D, Huber W, Wellenreuther R, Schleeger S, Mehrle A, Bechtel S, Sauermann M, Korf U, Pepperkok R, Sültmann H, Poustka A (October 2004). "From ORFeome to biology: a functional genomics pipeline". Genome Research. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Mehrle A, Rosenfelder H, Schupp I, del Val C, Arlt D, Hahne F, Bechtel S, Simpson J, Hofmann O, Hide W, Glatting KH, Huber W, Pepperkok R, Poustka A, Wiemann S (January 2006). "The LIFEdb database in 2006". Nucleic Acids Research. 34 (Database issue): D415-8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.
  • v
  • t
  • e