Erysipelotrichia
Erysipelotrichia | |
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Cellular and colonial morphology of Erysipelothrix rhusiopathiae. Upper row: ×1200, crystal violet; lower row: ×32 | |
Scientific classification | |
Domain: | Bacteria |
Phylum: | Bacillota |
Class: | Erysipelotrichia Ludwig et al. 2010 |
Order: | Erysipelotrichales Ludwig et al. 2010 |
Families | |
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The Erysipelotrichia are a class of bacteria of the phylum Bacillota. Species of this class are known to be common in the gut microbiome, as they have been isolated from swine manure[1] and increase in composition of the mouse gut microbiome for mice switched to diets high in fat.[2]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI)[4]
16S rRNA based LTP_08_2023[5][6][7] | 120 marker proteins based GTDB 08-RS214[8][9][10] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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♦ Paraphyletic Erysipelotrichia
See also
References
- ^ Han, Il; Congeevaram, Shankar; Ki, Dong-Won; Oh, Byoung-Taek; Park, Joonhong (5 October 2010). "Bacterial community analysis of swine manure treated with autothermal thermophilic aerobic digestion". Applied Microbiology and Biotechnology. 89 (3): 835–842. doi:10.1007/s00253-010-2893-8. PMID 20922382. S2CID 41004718.
- ^ Greiner, Thomas; Bäckhed, Fredrik (2011). "Effects of the gut microbiota on obesity and glucose homeostasis". Trends in Endocrinology & Metabolism. 22 (4): 117–123. doi:10.1016/j.tem.2011.01.002. PMID 21353592. S2CID 30862135.
- ^ J.P. Euzéby. "Erysipelotrichia". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 21 October 2016.
- ^ Sayers; et al. "Erysipelotrichia". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 20 March 2013.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
External links
- The Taxonomicon: Class Erysipelotrichi
- v
- t
- e
- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Hacrobia
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies