DIXDC1

Protein-coding gene in humans
DIXDC1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

3PZ7

Identifiers
AliasesDIXDC1, CCD1, DIX domain containing 1
External IDsOMIM: 610493; MGI: 2679721; HomoloGene: 82369; GeneCards: DIXDC1; OMA:DIXDC1 - orthologs
Gene location (Human)
Chromosome 11 (human)
Chr.Chromosome 11 (human)[1]
Chromosome 11 (human)
Genomic location for DIXDC1
Genomic location for DIXDC1
Band11q23.1Start111,927,144 bp[1]
End112,022,653 bp[1]
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[2]
Chromosome 9 (mouse)
Genomic location for DIXDC1
Genomic location for DIXDC1
Band9|9 A5.3Start50,574,052 bp[2]
End50,650,817 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • inferior ganglion of vagus nerve

  • corpus callosum

  • urethra

  • saphenous vein

  • superficial temporal artery

  • subthalamic nucleus

  • ventral tegmental area

  • synovial joint

  • mucosa of paranasal sinus
Top expressed in
  • lobe of cerebellum

  • cerebellar vermis

  • habenula

  • superior colliculus

  • pontine nuclei

  • epithelium of lens

  • dorsomedial hypothalamic nucleus

  • ventral tegmental area

  • neural layer of retina

  • medial dorsal nucleus
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • actin binding
  • gamma-tubulin binding
  • protein binding
  • protein domain specific binding
Cellular component
  • cytosol
  • cell junction
  • focal adhesion
  • cytoplasm
  • cytoskeleton
Biological process
  • positive regulation of canonical Wnt signaling pathway
  • multicellular organism development
  • positive regulation of Wnt signaling pathway
  • regulation of microtubule cytoskeleton organization
  • forebrain ventricular zone progenitor cell division
  • cerebral cortex radially oriented cell migration
  • cerebral cortex cell migration
  • regulation of actin cytoskeleton organization
  • negative regulation of neuron differentiation
  • Wnt signaling pathway
  • cell proliferation in forebrain
  • canonical Wnt signaling pathway
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

85458

330938

Ensembl

ENSG00000150764

ENSMUSG00000032064

UniProt

Q155Q3

Q80Y83

RefSeq (mRNA)

NM_001037954
NM_001278542
NM_033425

NM_178118
NM_001311069
NM_001374656

RefSeq (protein)

NP_001033043
NP_001265471
NP_219493

NP_001297998
NP_835219
NP_001361585

Location (UCSC)Chr 11: 111.93 – 112.02 MbChr 9: 50.57 – 50.65 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Dixin is a protein that in humans is encoded by the DIXDC1 gene.[5][6] When active it stops cancer metastasis due to extreme stickiness, both in vitro and in vivo.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000150764 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000032064 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Katoh M, Katoh M (July 2003). "KIAA1735 gene on human chromosome 11q23.1 encodes a novel protein with myosine-tail homologous domain and C-terminal DIX domain". International Journal of Oncology. 23 (1): 145–50. doi:10.3892/ijo.23.1.145. PMID 12792787.
  6. ^ "Entrez Gene: DIXDC1 DIX domain containing 1".
  7. ^ "New gene discovered that stops the spread of deadly cancer".

Further reading

  • Andersson B, Wentland MA, Ricafrente JY, Liu W, Gibbs RA (April 1996). "A "double adaptor" method for improved shotgun library construction". Analytical Biochemistry. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
  • Yu W, Andersson B, Worley KC, Muzny DM, Ding Y, Liu W, Ricafrente JY, Wentland MA, Lennon G, Gibbs RA (April 1997). "Large-scale concatenation cDNA sequencing". Genome Research. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
  • Nagase T, Kikuno R, Hattori A, Kondo Y, Okumura K, Ohara O (December 2000). "Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Research. 7 (6): 347–55. doi:10.1093/dnares/7.6.347. PMID 11214970.
  • Ohira M, Morohashi A, Inuzuka H, Shishikura T, Kawamoto T, Kageyama H, Nakamura Y, Isogai E, Takayasu H, Sakiyama S, Suzuki Y, Sugano S, Goto T, Sato S, Nakagawara A (August 2003). "Expression profiling and characterization of 4200 genes cloned from primary neuroblastomas: identification of 305 genes differentially expressed between favorable and unfavorable subsets". Oncogene. 22 (35): 5525–36. doi:10.1038/sj.onc.1206853. PMID 12934113.
  • Wong CK, Luo W, Deng Y, Zou H, Ye Z, Lin SC (September 2004). "The DIX domain protein coiled-coil-DIX1 inhibits c-Jun N-terminal kinase activation by Axin and dishevelled through distinct mechanisms". The Journal of Biological Chemistry. 279 (38): 39366–73. doi:10.1074/jbc.M404598200. PMID 15262978.
  • Kimura K, Wakamatsu A, Suzuki Y, Ota T, Nishikawa T, Yamashita R, Yamamoto J, Sekine M, Tsuritani K, Wakaguri H, Ishii S, Sugiyama T, Saito K, Isono Y, Irie R, Kushida N, Yoneyama T, Otsuka R, Kanda K, Yokoi T, Kondo H, Wagatsuma M, Murakawa K, Ishida S, Ishibashi T, Takahashi-Fujii A, Tanase T, Nagai K, Kikuchi H, Nakai K, Isogai T, Sugano S (January 2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Research. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
  • Wang X, Zheng L, Zeng Z, Zhou G, Chien J, Qian C, Vasmatzis G, Shridhar V, Chen L, Liu W (August 2006). "DIXDC1 isoform, l-DIXDC1, is a novel filamentous actin-binding protein". Biochemical and Biophysical Research Communications. 347 (1): 22–30. doi:10.1016/j.bbrc.2006.06.050. PMID 16814745.
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